This dataset contains CCS corrected HiFi long-read DNA sequencing (lrDNAseq) in FASTQ format for 100 PMDBS samples from Parkinson's patients and healthy controls. It's part of the PD5D atlas, where the same subjects were also profiled with other omics assays including genotyping, single-cell ATACseq, and spatial transcriptomics. ASAP Team: Scherzer Dataset Name: scherzer-pmdbs-lr-wgs, v1.0 Principal Investigator: Clemens Scherzer Co-Principal Investigator: Joshua Levin; Xianjun Dong Contributors: Kim, Kwanho; Lin, Zechuan; Simmons, Sean; Parker, Jacob; Kearney, Matthew; Liao, Zhixiang; Haywood, Nathan; Zhang, Jixiang; Cline, Madison; Tuncali, Idil; Sharma, Monika; Serrano, Geidy; Beach, Thomas; Dong, Xianjun; Popic, Victoria; Scherzer, Clemens; Levin, Joshua Sample Summary: Resources and Additional Information Protocols GitHub: https://github.com/kimkh415/VariantAnalysis Protocols: NA Dataset DOI: https://doi.org/10.5281/zenodo.19124632 Associated Publications: NA CRN Cloud GitHub: https://github.com/ASAP-CRN CRN Cloud Data Dictionary: https://storage.googleapis.com/asap-public-assets/wayfinding/ASAP-CRN-Cloud-Data-Dictionary.pdf CRN Cloud Release Number: v4.1.1 CRN Cloud DOI:...
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PD5D long-read WGS is published on ASAP CRN Cloud.